Problems setting up Upsource on Openshift (as Docker Container)

I am currently trying to set up the DockerContainer on OpenShift. Everything works fine locally but I am stuck on the OpemShift Deployment. Hosting works until I set up Upsource via the Frontend-Editor. I get the following services running

  • Upsource Configurator
  • Hub
  • Apache Cassandra
  • Upsource Cluster Initialize Service

But it fails on the "Upsource Frontend". I hope someone can tell something by this log but I am pretty lost at the moment.

 

Starting Upsource...
  * Configuring JetBrains Upsource 2018.1
  * Made default base-url 'http://localhost:8080/' from hostname 'localhost' and listen port '8080'
  * JetBrains Upsource 2018.1 runtime environment is successfully configured
  * Loading logging configuration from /opt/upsource/lib/ext/log4j.xml
  * Redirecting JetBrains Upsource 2018.1 logging to /opt/upsource/logs/internal/services/bundleProcess
  * Configuring Service-Container[bundleProcess]
  * Configuring Bundle Backend Service
  * Configuring Configuration Wizard
  * Starting Service-Container[bundleProcess]
  * Starting Bundle Backend Service
  * Starting Configuration Wizard
  * JetBrains Upsource 2018.1 Configuration Wizard will listen inside container on {0.0.0.0:8080}/ after start and can be accessed by URL [http://<put-your-docker-HOST-name-here>:<put-host-port-mapped-to-container-port-8080-here>/?wizard_token=LLWtq0TqV8GHh4Mlnhq1]
  * Stopping Configuration Wizard
  * Stopping Bundle Backend Service
  * Stopping Service-Container[bundleProcess]
  * Configuring JetBrains Upsource 2018.1
  * JetBrains Upsource 2018.1 runtime environment is successfully configured
  * Stopping Configuration Wizard
  * Stopping Bundle Backend Service
  * Stopping Service-Container[bundleProcess]
  Upsource process finished
  Launcher is restarting Upsource process
  * JetBrains Upsource 2018.1 runtime environment is successfully configured
  * Loading logging configuration from /opt/upsource/lib/ext/log4j.xml
  * Redirecting JetBrains Upsource 2018.1 logging to /opt/upsource/logs/internal/services/bundleProcess
  * Configuring Service-Container[bundleProcess]
  * Configuring Bundle Backend Service
  * Configuring Starting Page Service
  * Configuring Upsource Configurator
  * Configuring Hub
  * Configuring Bundle Hub Configurator
  * Configuring Apache Cassandra
  * Configuring Upsource Cluster Initialize Service
  * Configuring Upsource Frontend
  * Starting Service-Container[bundleProcess]
  * Starting Bundle Backend Service
  * Starting Starting Page Service
  * JetBrains Upsource 2018.1 will be available on [http://upsource.your-cluster.net/bundle/starting] after start
  * Starting Upsource Configurator
  * Starting Hub
  [Upsource Error] ERROR StatusLogger No log4j2 configuration file found. Using default configuration: logging only errors to the console. Set system property 'org.apache.logging.log4j.simplelog.StatusLogger.level' to TRACE to show Log4j2 internal initialization logging.
  Hub log folder initialized: /opt/upsource/logs/hub
  gflogger: version 20131206
  * Starting Bundle Hub Configurator
  2018-10-15 13:50:22,124 qtp656089969-113 ERROR No log4j2 configuration file found. Using default configuration: logging only errors to the console. Set system property 'org.apache.logging.log4j.simplelog.StatusLogger.level' to TRACE to show Log4j2 internal initialization logging.
  * Starting Apache Cassandra
  cassandra: Starting Apache Cassandra...
  cassandra: Logback file: '/opt/upsource/conf/cassandra/logback.xml.dist'.
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:29,400 [[APP-WRAPPER] Proxy 1] WARN o.a.c.config.DatabaseDescriptor - Small commitlog volume detected at /opt/upsource/data/cassandra/commitlog; setting commitlog_total_space_in_mb to 6395. You can override this in cassandra.yaml
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:29,403 [[APP-WRAPPER] Proxy 1] WARN o.a.c.config.DatabaseDescriptor - Small cdc volume detected at /opt/upsource/data/cassandra/data/cdc_raw; setting cdc_total_space_in_mb to 3197. You can override this in cassandra.yaml
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:29,406 [[APP-WRAPPER] Proxy 1] WARN o.a.c.config.DatabaseDescriptor - Only 23.304GiB free across all data volumes. Consider adding more capacity to your cluster or removing obsolete snapshots
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:30,012 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.utils.NativeLibrary - Unable to lock JVM memory (ENOMEM). This can result in part of the JVM being swapped out, especially with mmapped I/O enabled. Increase RLIMIT_MEMLOCK or run Cassandra as root.
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:30,012 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - jemalloc shared library could not be preloaded to speed up memory allocations
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:30,013 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - JMX is not enabled to receive remote connections. Please see cassandra-env.sh for more info.
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:30,013 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - The JVM is not configured to stop on OutOfMemoryError which can cause data corruption. Use one of the following JVM options to configure the behavior on OutOfMemoryError: -XX:+ExitOnOutOfMemoryError, -XX:+CrashOnOutOfMemoryError, or -XX:OnOutOfMemoryError="<cmd args>;<cmd args>"
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:30,050 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - Maximum number of memory map areas per process (vm.max_map_count) 262144 is too low, recommended value: 1048575, you can change it with sysctl.
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:30,071 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - Directory /opt/upsource/data/cassandra/data/hints doesn't exist
  cassandra: [Apache Cassandra Error] 2018-10-15T13:50:33,891 [[APP-WRAPPER] Proxy 1] WARN o.apache.cassandra.db.SystemKeyspace - No host ID found, created 7c528e3a-7667-4f23-89af-62650876279e (Note: This should happen exactly once per node).
  cassandra: Apache Cassandra is running
  * Starting Upsource Cluster Initialize Service
  upsource-cluster-init: Starting Upsource Cluster Initialize Service...
  upsource-cluster-init: Loading Upsource properties file: /opt/upsource/conf/upsource-cluster-init/upsource.properties
  upsource-cluster-init: Upsource properties file /opt/upsource/conf/upsource.user.properties not found!
  upsource-cluster-init: Writing logs to /opt/upsource/logs/upsource-cluster-init
  upsource-cluster-init: Using logs configuration from /opt/upsource/conf/upsource-cluster-init/log4j.xml.dist
  upsource-cluster-init: [Upsource Cluster Initialize Service Error] [2018-10-15 13:50:49,778] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - This mail service is disabled
  upsource-cluster-init: [Upsource Cluster Initialize Service Error] [2018-10-15 13:50:49,779] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - From address is empty
  upsource-cluster-init: Upsource Cluster Initialize Service is running
  * Starting Upsource Frontend
  upsource-frontend: Starting Upsource Frontend...
  upsource-frontend: Loading Upsource properties file: /opt/upsource/conf/upsource-frontend/upsource.properties
  upsource-frontend: Upsource properties file /opt/upsource/conf/upsource.user.properties not found!
  upsource-frontend: Writing logs to /opt/upsource/logs/upsource-frontend
  upsource-frontend: Using logs configuration from /opt/upsource/conf/upsource-frontend/log4j.xml.dist
  upsource-frontend: [Upsource Frontend Error] [2018-10-15 13:51:15,042] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - This mail service is disabled
  upsource-frontend: [Upsource Frontend Error] [2018-10-15 13:51:15,044] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - From address is empty
  upsource-frontend: [Upsource Frontend Error] [2018-10-15 13:51:43,232] WARN 171-b11-1~deb9u1-b11 ing.MonitoringNettyInitializer - Monitoring port is not defined - monitoring server is disabled
  upsource-frontend: [Upsource Frontend Error] [2018-10-15 13:51:43,338] WARN 171-b11-1~deb9u1-b11 ring.ClusterStatisticsReporter - Statistics reporting disabled by upsource.statistics.upload property
  upsource-frontend: [Upsource Frontend Error] [2018-10-15 13:51:55,357] ERROR 171-b11-1~deb9u1-b11 ver.daemon.JointServicesDaemon -
  upsource-frontend: [Upsource Frontend Error] java.lang.Error: Failed to process index.html
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:176)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.<init>(IndexHtmlHandler.kt:76)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.a(NettyInitializer.kt:332)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.<init>(NettyInitializer.kt:116)
  upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
  upsource-frontend: [Upsource Frontend Error] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
  upsource-frontend: [Upsource Frontend Error] at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.InstantiatingComponentAdapter.newInstance(InstantiatingComponentAdapter.java:193)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter$1.run(ConstructorInjectionComponentAdapter.java:220)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ThreadLocalCyclicDependencyGuard.observe(ThreadLocalCyclicDependencyGuard.java:53)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter.getComponentInstance(ConstructorInjectionComponentAdapter.java:248)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DecoratingComponentAdapter.getComponentInstance(DecoratingComponentAdapter.java:60)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.CachingComponentAdapter.getComponentInstance(CachingComponentAdapter.java:58)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:395)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstancesOfType(DefaultPicoContainer.java:351)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstances(DefaultPicoContainer.java:339)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.a(ContainerFactory.java:253)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.access$000(ContainerFactory.java:22)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory$1.compose(ContainerFactory.java:174)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.Server.run(Server.java:68)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.UpsourceFrontendDaemon.start(UpsourceFrontendDaemon.java:31)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:37)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:128)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:222)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:59)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:99)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:97)
  upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.FutureTask.run(FutureTask.java:266)
  upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  upsource-frontend: [Upsource Frontend Error] at java.lang.Thread.run(Thread.java:748)
  upsource-frontend: [Upsource Frontend Error] Caused by: java.io.FileNotFoundException: /opt/upsource/lib/upsource/www/search.xml (Permission denied)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open0(Native Method)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open(FileOutputStream.java:270)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:101)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:150)
  upsource-frontend: [Upsource Frontend Error] ... 33 more
  upsource-frontend: [Upsource Frontend Error] [2018-10-15 13:52:01,134] ERROR 171-b11-1~deb9u1-b11 ver.daemon.JointServicesDaemon - Unable to start daemon
  upsource-frontend: [Upsource Frontend Error] java.lang.Error: Failed to process index.html
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:176)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.<init>(IndexHtmlHandler.kt:76)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.a(NettyInitializer.kt:332)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.<init>(NettyInitializer.kt:116)
  upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
  upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
  upsource-frontend: [Upsource Frontend Error] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
  upsource-frontend: [Upsource Frontend Error] at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.InstantiatingComponentAdapter.newInstance(InstantiatingComponentAdapter.java:193)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter$1.run(ConstructorInjectionComponentAdapter.java:220)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ThreadLocalCyclicDependencyGuard.observe(ThreadLocalCyclicDependencyGuard.java:53)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter.getComponentInstance(ConstructorInjectionComponentAdapter.java:248)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DecoratingComponentAdapter.getComponentInstance(DecoratingComponentAdapter.java:60)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.CachingComponentAdapter.getComponentInstance(CachingComponentAdapter.java:58)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:395)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstancesOfType(DefaultPicoContainer.java:351)
  upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstances(DefaultPicoContainer.java:339)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.a(ContainerFactory.java:253)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.access$000(ContainerFactory.java:22)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory$1.compose(ContainerFactory.java:174)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.Server.run(Server.java:68)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.UpsourceFrontendDaemon.start(UpsourceFrontendDaemon.java:31)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:37)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:128)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:222)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:59)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:99)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:97)
  upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.FutureTask.run(FutureTask.java:266)
  upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
  upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
  upsource-frontend: [Upsource Frontend Error] at java.lang.Thread.run(Thread.java:748)
  upsource-frontend: [Upsource Frontend Error] Caused by: java.io.FileNotFoundException: /opt/upsource/lib/upsource/www/search.xml (Permission denied)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open0(Native Method)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open(FileOutputStream.java:270)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
  upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:101)
  upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:150)
  upsource-frontend: [Upsource Frontend Error] ... 33 more
  upsource-frontend: [Upsource Frontend Error] Failed to process index.html
  upsource-frontend: [Upsource Frontend Error] log4j:WARN No appenders could be found for logger (com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon).
  upsource-frontend: [Upsource Frontend Error] log4j:WARN Please initialize the log4j system properly.
  upsource-frontend: [Upsource Frontend Error] log4j:WARN See http://logging.apache.org/log4j/1.2/faq.html#noconfig for more info.
  upsource-frontend: Upsource Frontend process finished
  upsource-frontend: Launcher is exiting
  upsource-frontend: Upsource Frontend failed to start
  * Error while starting JetBrains Upsource 2018.1: Not allowed exit code 255 from process: bin/upsource-frontend start
  [Upsource Error] [2018-10-15 13:52:02,844] ERROR - bundle.startup - Error while starting JetBrains Upsource 2018.1: Not allowed exit code 255 from process: bin/upsource-frontend start
  * Stopping Upsource Frontend
  upsource-frontend: Upsource Frontend is not running
  * Stopping Upsource Cluster Initialize Service
  upsource-cluster-init: Upsource Cluster Initialize Service is not running
  * Stopping Apache Cassandra
  cassandra: Apache Cassandra has shut down
  * Stopping Bundle Hub Configurator
  * Stopping Hub
  * Stopping Upsource Configurator
  * Stopping Starting Page Service
  * Stopping Bundle Backend Service
  * Stopping Service-Container[bundleProcess]
  [Upsource Error] [2018-10-15 13:52:12,664] WARN - y.util.thread.QueuedThreadPool - qtp656089969{STOPPING,8<=54<=200,i=35,q=43} Couldn't stop Thread[qtp656089969-143,5,]
  [Upsource Error] [2018-10-15 13:52:12,668] WARN - y.util.thread.QueuedThreadPool - qtp656089969{STOPPING,8<=54<=200,i=16,q=38} Couldn't stop Thread[qtp656089969-117,5,]
  [Upsource Error] [2018-10-15 13:52:12,671] WARN - y.util.thread.QueuedThreadPool - qtp656089969{STOPPING,8<=54<=200,i=14,q=38} Couldn't stop Thread[qtp656089969-149,5,]
  [Upsource Error] [2018-10-15 13:52:12,673] WARN - y.util.thread.QueuedThreadPool - qtp656089969{STOPPING,8<=54<=200,i=3,q=38} Couldn't stop Thread[qtp656089969-170,5,]
  [Upsource Error] [2018-10-15 13:52:12,674] WARN - y.util.thread.QueuedThreadPool - qtp656089969{STOPPING,8<=54<=200,i=0,q=38} Couldn't stop Thread[qtp656089969-146,5,]
  Upsource process finished
  Launcher is exiting
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Hi All,

I am having a similar issue. Does anyone know a fix for this? Thanks.

Log output:

Started with PID 6, waiting for exit signal.
Starting Upsource...
* Configuring JetBrains Upsource 2018.2
* Made default base-url 'http://upsource-2-6pnfk:8080/' from hostname 'upsource-2-6pnfk' and listen port '8080'
* JetBrains Upsource 2018.2 runtime environment is successfully configured
* Loading logging configuration from /upsource/lib/ext/log4j.xml
* Redirecting JetBrains Upsource 2018.2 logging to /upsource/logs/internal/services/bundleProcess
* Configuring Service-Container[bundleProcess]
* Configuring Bundle Backend Service
* Configuring Configuration Wizard
* Starting Service-Container[bundleProcess]
* Starting Bundle Backend Service
* Starting Configuration Wizard
* JetBrains Upsource 2018.2 Configuration Wizard will be available on [http://upsource-2-6pnfk:8080?wizard_token=pkQNa7QXpZt8CIYC1Qsw ] after start
* Stopping Configuration Wizard
* Stopping Bundle Backend Service
* Stopping Service-Container[bundleProcess]
* Configuring JetBrains Upsource 2018.2
* JetBrains Upsource 2018.2 runtime environment is successfully configured
* Stopping Configuration Wizard
* Stopping Bundle Backend Service
* Stopping Service-Container[bundleProcess]
Upsource process finished
Launcher is restarting Upsource process
* JetBrains Upsource 2018.2 runtime environment is successfully configured
* Loading logging configuration from /upsource/lib/ext/log4j.xml
* Redirecting JetBrains Upsource 2018.2 logging to /upsource/logs/internal/services/bundleProcess
* Configuring Service-Container[bundleProcess]
* Configuring Bundle Backend Service
* Configuring Starting Page Service
* Configuring Upsource Configurator
* Configuring Hub
* Configuring Bundle Hub Configurator
* Configuring Apache Cassandra
* Configuring Upsource Cluster Initialize Service
* Configuring Upsource Frontend
* Starting Service-Container[bundleProcess]
* Starting Bundle Backend Service
* Starting Starting Page Service
* JetBrains Upsource 2018.2 will be available on [http://upsource-http-dms.192.168.64.36.nip.io/bundle/starting ] after start
* Starting Upsource Configurator
* Starting Hub
Initializing Hub log folder: /upsource/logs/hub
gflogger: version 20131206
* Starting Bundle Hub Configurator
* Starting Apache Cassandra
cassandra: Starting Apache Cassandra...
cassandra: Logback file: '/upsource/conf/cassandra/logback.xml.dist'.
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:25,428 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.utils.NativeLibrary - Unable to lock JVM memory (ENOMEM). This can result in part of the JVM being swapped out, especially with mmapped I/O enabled. Increase RLIMIT_MEMLOCK or run Cassandra as root.
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:25,428 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - jemalloc shared library could not be preloaded to speed up memory allocations
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:25,428 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - JMX is not enabled to receive remote connections. Please see cassandra-env.sh for more info.
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:25,431 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - The JVM is not configured to stop on OutOfMemoryError which can cause data corruption. Use one of the following JVM options to configure the behavior on OutOfMemoryError: -XX:+ExitOnOutOfMemoryError, -XX:+CrashOnOutOfMemoryError, or -XX:OnOutOfMemoryError="<cmd args>;<cmd args>"
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:25,460 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - Maximum number of memory map areas per process (vm.max_map_count) 65530 is too low, recommended value: 1048575, you can change it with sysctl.
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:25,477 [[APP-WRAPPER] Proxy 1] WARN o.a.cassandra.service.StartupChecks - Directory /upsource/data/cassandra/data/hints doesn't exist
cassandra: [Apache Cassandra Error] 2019-03-06T11:08:29,232 [[APP-WRAPPER] Proxy 1] WARN o.apache.cassandra.db.SystemKeyspace - No host ID found, created 397b334e-58b6-4296-a7e4-6b6ecd5dafd7 (Note: This should happen exactly once per node).
cassandra: Apache Cassandra is running
* Starting Upsource Cluster Initialize Service
upsource-cluster-init: Starting Upsource Cluster Initialize Service...
upsource-cluster-init: Loading Upsource properties file: /upsource/conf/upsource-cluster-init/upsource.properties
upsource-cluster-init: Upsource properties file /upsource/conf/upsource.user.properties not found!
upsource-cluster-init: Writing logs to /upsource/logs/upsource-cluster-init
upsource-cluster-init: Using logs configuration from /upsource/conf/upsource-cluster-init/log4j.xml.dist
upsource-cluster-init: [Upsource Cluster Initialize Service Error] [2019-03-06 11:08:45,039] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - This mail service is disabled
upsource-cluster-init: [Upsource Cluster Initialize Service Error] [2019-03-06 11:08:45,052] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - From address is empty
upsource-cluster-init: Upsource Cluster Initialize Service is running
* Starting Upsource Frontend
upsource-frontend: Starting Upsource Frontend...
upsource-frontend: Loading Upsource properties file: /upsource/conf/upsource-frontend/upsource.properties
upsource-frontend: Upsource properties file /upsource/conf/upsource.user.properties not found!
upsource-frontend: Writing logs to /upsource/logs/upsource-frontend
upsource-frontend: Using logs configuration from /upsource/conf/upsource-frontend/log4j.xml.dist
upsource-frontend: [Upsource Frontend Error] [2019-03-06 11:09:22,260] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - This mail service is disabled
upsource-frontend: [Upsource Frontend Error] [2019-03-06 11:09:22,260] WARN SMTPSettingsUpdate-1 ettings.api.StaticMailSettings - From address is empty
upsource-frontend: [Upsource Frontend Error] [2019-03-06 11:10:04,782] WARN ration 1.8.0_191-b12 ing.MonitoringNettyInitializer - Monitoring port is not defined - monitoring server is disabled
upsource-frontend: [Upsource Frontend Error] [2019-03-06 11:10:16,166] ERROR ration 1.8.0_191-b12 ver.daemon.JointServicesDaemon -
upsource-frontend: [Upsource Frontend Error] java.lang.Error: Failed to process index.html
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:176)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.<init>(IndexHtmlHandler.kt:76)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.a(NettyInitializer.kt:332)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.<init>(NettyInitializer.kt:116)
upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
upsource-frontend: [Upsource Frontend Error] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
upsource-frontend: [Upsource Frontend Error] at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.InstantiatingComponentAdapter.newInstance(InstantiatingComponentAdapter.java:193)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter$1.run(ConstructorInjectionComponentAdapter.java:220)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ThreadLocalCyclicDependencyGuard.observe(ThreadLocalCyclicDependencyGuard.java:53)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter.getComponentInstance(ConstructorInjectionComponentAdapter.java:248)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DecoratingComponentAdapter.getComponentInstance(DecoratingComponentAdapter.java:60)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.CachingComponentAdapter.getComponentInstance(CachingComponentAdapter.java:58)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:395)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstancesOfType(DefaultPicoContainer.java:351)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstances(DefaultPicoContainer.java:339)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.a(ContainerFactory.java:253)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.access$000(ContainerFactory.java:22)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory$1.compose(ContainerFactory.java:174)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.Server.run(Server.java:68)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.UpsourceFrontendDaemon.start(UpsourceFrontendDaemon.java:31)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:37)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:128)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:222)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:59)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:99)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:97)
upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.FutureTask.run(FutureTask.java:266)
upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
upsource-frontend: [Upsource Frontend Error] at java.lang.Thread.run(Thread.java:748)
upsource-frontend: [Upsource Frontend Error] Caused by: java.io.FileNotFoundException: /upsource/lib/upsource/www/search.xml (Permission denied)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open0(Native Method)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open(FileOutputStream.java:270)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:101)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:150)
upsource-frontend: [Upsource Frontend Error] ... 33 more
upsource-frontend: [Upsource Frontend Error] [2019-03-06 11:10:21,620] ERROR ration 1.8.0_191-b12 ver.daemon.JointServicesDaemon - Unable to start daemon
upsource-frontend: [Upsource Frontend Error] java.lang.Error: Failed to process index.html
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:176)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.<init>(IndexHtmlHandler.kt:76)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.a(NettyInitializer.kt:332)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.NettyInitializer.<init>(NettyInitializer.kt:116)
upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
upsource-frontend: [Upsource Frontend Error] at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
upsource-frontend: [Upsource Frontend Error] at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
upsource-frontend: [Upsource Frontend Error] at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.InstantiatingComponentAdapter.newInstance(InstantiatingComponentAdapter.java:193)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter$1.run(ConstructorInjectionComponentAdapter.java:220)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ThreadLocalCyclicDependencyGuard.observe(ThreadLocalCyclicDependencyGuard.java:53)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.ConstructorInjectionComponentAdapter.getComponentInstance(ConstructorInjectionComponentAdapter.java:248)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DecoratingComponentAdapter.getComponentInstance(DecoratingComponentAdapter.java:60)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.CachingComponentAdapter.getComponentInstance(CachingComponentAdapter.java:58)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getInstance(DefaultPicoContainer.java:395)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstancesOfType(DefaultPicoContainer.java:351)
upsource-frontend: [Upsource Frontend Error] at org.picocontainer.defaults.DefaultPicoContainer.getComponentInstances(DefaultPicoContainer.java:339)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.a(ContainerFactory.java:253)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory.access$000(ContainerFactory.java:22)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.container.ContainerFactory$1.compose(ContainerFactory.java:174)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.Server.run(Server.java:68)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.UpsourceFrontendDaemon.start(UpsourceFrontendDaemon.java:31)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:37)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.cli.UpsourceApplicationEnvironmentDaemonBase.startDaemon(UpsourceApplicationEnvironmentDaemonBase.java:39)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:128)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.daemon.UpsourceDaemonBase.start(UpsourceDaemonBase.java:222)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.backend.server.daemon.JointServicesDaemon.start(JointServicesDaemon.java:59)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:99)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.launcher.AppProxy$6$1.call(AppProxy.java:97)
upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.FutureTask.run(FutureTask.java:266)
upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
upsource-frontend: [Upsource Frontend Error] at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
upsource-frontend: [Upsource Frontend Error] at java.lang.Thread.run(Thread.java:748)
upsource-frontend: [Upsource Frontend Error] Caused by: java.io.FileNotFoundException: /upsource/lib/upsource/www/search.xml (Permission denied)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open0(Native Method)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.open(FileOutputStream.java:270)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:213)
upsource-frontend: [Upsource Frontend Error] at java.io.FileOutputStream.<init>(FileOutputStream.java:101)
upsource-frontend: [Upsource Frontend Error] at com.jetbrains.upsource.frontend.server.handlers.index.IndexHtmlHandler.a(IndexHtmlHandler.kt:150)
upsource-frontend: [Upsource Frontend Error] ... 33 more
upsource-frontend: [Upsource Frontend Error] Failed to process index.html
upsource-frontend: Upsource Frontend process finished
upsource-frontend: Launcher is exiting
upsource-frontend: Upsource Frontend failed to start
* Error while starting JetBrains Upsource 2018.2: Not allowed exit code 255 from process: bin/upsource-frontend start
[Upsource Error] [2019-03-06 11:10:22,317] ERROR - bundle.startup - Error while starting JetBrains Upsource 2018.2: Not allowed exit code 255 from process: bin/upsource-frontend start
* Stopping Upsource Frontend
upsource-frontend: Upsource Frontend is not running
* Stopping Upsource Cluster Initialize Service
upsource-cluster-init: Upsource Cluster Initialize Service is not running
* Stopping Apache Cassandra
cassandra: Apache Cassandra has shut down
* Stopping Bundle Hub Configurator
* Stopping Hub
* Stopping Upsource Configurator
* Stopping Starting Page Service
* Stopping Bundle Backend Service
* Stopping Service-Container[bundleProcess]
[Upsource Error] [2019-03-06 11:10:31,996] WARN - y.util.thread.QueuedThreadPool - qtp276081013{STOPPING,8<=8<=200,i=3,q=5} Couldn't stop Thread[qtp276081013-102,5,]
[Upsource Error] [2019-03-06 11:10:31,998] WARN - y.util.thread.QueuedThreadPool - qtp276081013{STOPPING,8<=8<=200,i=3,q=5} Couldn't stop Thread[qtp276081013-161,5,]
[Upsource Error] [2019-03-06 11:10:31,998] WARN - y.util.thread.QueuedThreadPool - qtp276081013{STOPPING,8<=8<=200,i=1,q=5} Couldn't stop Thread[qtp276081013-98,5,main]
[Upsource Error] [2019-03-06 11:10:31,998] WARN - y.util.thread.QueuedThreadPool - qtp276081013{STOPPING,8<=8<=200,i=1,q=5} Couldn't stop Thread[qtp276081013-99,5,main]
Upsource process finished
Launcher is exiting

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